Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.95■□□□□ 0.94
Prom1O54990 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prom1O54990 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prom1O54990 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.94■□□□□ 0.94
Prom1O54990 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Prom1O54990 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prom1O54990 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prom1O54990 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.93■□□□□ 0.94
Prom1O54990 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Prom1O54990 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.93■□□□□ 0.94
Prom1O54990 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prom1O54990 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prom1O54990 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prom1O54990 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.92■□□□□ 0.94
Prom1O54990 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.92■□□□□ 0.94
Prom1O54990 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prom1O54990 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prom1O54990 Gm5643-201ENSMUST00000117081 966 ntBASIC20.92■□□□□ 0.94
Prom1O54990 Gm2559-201ENSMUST00000201323 363 ntBASIC20.92■□□□□ 0.94
Prom1O54990 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Prom1O54990 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prom1O54990 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prom1O54990 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prom1O54990 Dio3-201ENSMUST00000097228 1449 ntBASIC20.92■□□□□ 0.94
Prom1O54990 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prom1O54990 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Prom1O54990 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.91■□□□□ 0.94
Prom1O54990 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Prom1O54990 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.91■□□□□ 0.94
Prom1O54990 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.91■□□□□ 0.94
Prom1O54990 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.91■□□□□ 0.94
Prom1O54990 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prom1O54990 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Prom1O54990 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Prom1O54990 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.9■□□□□ 0.94
Prom1O54990 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prom1O54990 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prom1O54990 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prom1O54990 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prom1O54990 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prom1O54990 Gm11249-201ENSMUST00000117071 859 ntBASIC20.89■□□□□ 0.93
Prom1O54990 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.89■□□□□ 0.93
Prom1O54990 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prom1O54990 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prom1O54990 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Prom1O54990 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prom1O54990 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.88■□□□□ 0.93
Prom1O54990 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Prom1O54990 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Prom1O54990 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.87■□□□□ 0.93
Prom1O54990 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prom1O54990 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prom1O54990 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prom1O54990 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prom1O54990 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.86■□□□□ 0.93
Prom1O54990 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Prom1O54990 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prom1O54990 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prom1O54990 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prom1O54990 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prom1O54990 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Prom1O54990 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prom1O54990 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Prom1O54990 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Prom1O54990 Gm2399-201ENSMUST00000104944 225 ntBASIC20.85■□□□□ 0.93
Prom1O54990 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prom1O54990 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.85■□□□□ 0.93
Prom1O54990 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms