Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc4O35988 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc4O35988 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.46■□□□□ 0.71
Sdc4O35988 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sdc4O35988 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Sdc4O35988 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.46■□□□□ 0.71
Sdc4O35988 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.46■□□□□ 0.71
Sdc4O35988 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sdc4O35988 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.46■□□□□ 0.71
Sdc4O35988 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc4O35988 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sdc4O35988 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.45■□□□□ 0.7
Sdc4O35988 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc4O35988 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc4O35988 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc4O35988 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc4O35988 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Sdc4O35988 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sdc4O35988 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc4O35988 Gm4968-201ENSMUST00000071458 858 ntBASIC19.44■□□□□ 0.7
Sdc4O35988 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc4O35988 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sdc4O35988 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc4O35988 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sdc4O35988 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc4O35988 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc4O35988 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.43■□□□□ 0.7
Sdc4O35988 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Sdc4O35988 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Sdc4O35988 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Gm27011-201ENSMUST00000182352 972 ntBASIC19.43■□□□□ 0.7
Sdc4O35988 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Sdc4O35988 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc4O35988 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.42■□□□□ 0.7
Sdc4O35988 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sdc4O35988 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Sdc4O35988 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.42■□□□□ 0.7
Sdc4O35988 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sdc4O35988 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc4O35988 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.41■□□□□ 0.7
Sdc4O35988 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Sdc4O35988 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc4O35988 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.41■□□□□ 0.7
Sdc4O35988 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc4O35988 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc4O35988 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc4O35988 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc4O35988 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc4O35988 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc4O35988 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc4O35988 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms