Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Npc1O35604 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.38■□□□□ 0.53
Npc1O35604 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.38■□□□□ 0.53
Npc1O35604 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.38■□□□□ 0.53
Npc1O35604 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1O35604 Golph3-205ENSMUST00000228671 2842 ntBASIC18.37■□□□□ 0.53
Npc1O35604 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1O35604 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1O35604 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1O35604 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1O35604 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1O35604 Gm7860-201ENSMUST00000121190 879 ntBASIC18.36■□□□□ 0.53
Npc1O35604 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1O35604 Gm38205-201ENSMUST00000192243 258 ntBASIC18.36■□□□□ 0.53
Npc1O35604 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.36■□□□□ 0.53
Npc1O35604 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Npc1O35604 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Npc1O35604 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.36■□□□□ 0.53
Npc1O35604 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1O35604 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1O35604 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1O35604 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Npc1O35604 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.35■□□□□ 0.53
Npc1O35604 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Npc1O35604 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Npc1O35604 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Gm12933-201ENSMUST00000120203 872 ntBASIC18.35■□□□□ 0.53
Npc1O35604 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Npc1O35604 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Npc1O35604 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.34■□□□□ 0.53
Npc1O35604 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.34■□□□□ 0.53
Npc1O35604 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.34■□□□□ 0.53
Npc1O35604 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.34■□□□□ 0.53
Npc1O35604 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.34■□□□□ 0.53
Npc1O35604 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Npc1O35604 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.34■□□□□ 0.53
Npc1O35604 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Npc1O35604 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1O35604 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1O35604 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.33■□□□□ 0.53
Npc1O35604 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1O35604 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Npc1O35604 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1O35604 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1O35604 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.33■□□□□ 0.52
Npc1O35604 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1O35604 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Npc1O35604 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1O35604 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Npc1O35604 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.33■□□□□ 0.52
Npc1O35604 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Npc1O35604 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
Npc1O35604 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.32■□□□□ 0.52
Npc1O35604 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.32■□□□□ 0.52
Npc1O35604 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.32■□□□□ 0.52
Npc1O35604 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npc1O35604 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms