Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Slc1a6O35544 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc1a6O35544 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.59■□□□□ 0.57
Slc1a6O35544 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc1a6O35544 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.58■□□□□ 0.57
Slc1a6O35544 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc1a6O35544 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc1a6O35544 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.58■□□□□ 0.56
Slc1a6O35544 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc1a6O35544 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.58■□□□□ 0.56
Slc1a6O35544 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc1a6O35544 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc1a6O35544 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc1a6O35544 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc1a6O35544 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc1a6O35544 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.57■□□□□ 0.56
Slc1a6O35544 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc1a6O35544 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc1a6O35544 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Slc1a6O35544 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.57■□□□□ 0.56
Slc1a6O35544 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc1a6O35544 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.57■□□□□ 0.56
Slc1a6O35544 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Slc1a6O35544 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Slc1a6O35544 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Slc1a6O35544 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.56■□□□□ 0.56
Slc1a6O35544 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc1a6O35544 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.55■□□□□ 0.56
Slc1a6O35544 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Slc1a6O35544 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Slc1a6O35544 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc1a6O35544 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.54■□□□□ 0.56
Slc1a6O35544 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Slc1a6O35544 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Slc1a6O35544 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.54■□□□□ 0.56
Slc1a6O35544 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc1a6O35544 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.53■□□□□ 0.56
Slc1a6O35544 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc1a6O35544 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc1a6O35544 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms