Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clk3O35492 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Clk3O35492 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.91■□□□□ 0.46
Clk3O35492 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Clk3O35492 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.91■□□□□ 0.46
Clk3O35492 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Gm6139-201ENSMUST00000079261 882 ntBASIC17.91■□□□□ 0.46
Clk3O35492 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Clk3O35492 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clk3O35492 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.9■□□□□ 0.46
Clk3O35492 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Clk3O35492 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.9■□□□□ 0.46
Clk3O35492 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Clk3O35492 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clk3O35492 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clk3O35492 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Clk3O35492 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Clk3O35492 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clk3O35492 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Clk3O35492 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.89■□□□□ 0.45
Clk3O35492 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.89■□□□□ 0.45
Clk3O35492 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.89■□□□□ 0.45
Clk3O35492 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clk3O35492 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clk3O35492 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 BC021767-201ENSMUST00000126387 1716 ntBASIC17.89■□□□□ 0.45
Clk3O35492 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clk3O35492 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clk3O35492 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.88■□□□□ 0.45
Clk3O35492 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clk3O35492 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.88■□□□□ 0.45
Clk3O35492 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Clk3O35492 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Gm12251-201ENSMUST00000117893 792 ntBASIC17.88■□□□□ 0.45
Clk3O35492 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Clk3O35492 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.88■□□□□ 0.45
Clk3O35492 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Clk3O35492 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clk3O35492 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.87■□□□□ 0.45
Clk3O35492 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.87■□□□□ 0.45
Clk3O35492 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Clk3O35492 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clk3O35492 AA386476-201ENSMUST00000098781 1665 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms