Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Clcn6O35454 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn6O35454 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn6O35454 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Clcn6O35454 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.84■□□□□ 0.77
Clcn6O35454 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn6O35454 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Clcn6O35454 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn6O35454 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn6O35454 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn6O35454 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn6O35454 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Clcn6O35454 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.84■□□□□ 0.77
Clcn6O35454 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn6O35454 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn6O35454 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn6O35454 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Clcn6O35454 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Clcn6O35454 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Clcn6O35454 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.83■□□□□ 0.77
Clcn6O35454 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.83■□□□□ 0.77
Clcn6O35454 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.83■□□□□ 0.77
Clcn6O35454 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC19.83■□□□□ 0.77
Clcn6O35454 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn6O35454 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Clcn6O35454 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn6O35454 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn6O35454 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn6O35454 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn6O35454 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn6O35454 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn6O35454 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn6O35454 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Clcn6O35454 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.82■□□□□ 0.76
Clcn6O35454 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn6O35454 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn6O35454 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn6O35454 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Clcn6O35454 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn6O35454 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn6O35454 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Clcn6O35454 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.81■□□□□ 0.76
Clcn6O35454 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn6O35454 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.81■□□□□ 0.76
Clcn6O35454 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn6O35454 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn6O35454 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn6O35454 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn6O35454 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.81■□□□□ 0.76
Clcn6O35454 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn6O35454 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn6O35454 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Gm12821-201ENSMUST00000120022 600 ntBASIC19.8■□□□□ 0.76
Clcn6O35454 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.8■□□□□ 0.76
Clcn6O35454 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.8■□□□□ 0.76
Clcn6O35454 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.8■□□□□ 0.76
Clcn6O35454 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn6O35454 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.79■□□□□ 0.76
Clcn6O35454 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.79■□□□□ 0.76
Clcn6O35454 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Gm36943-201ENSMUST00000194422 282 ntBASIC19.79■□□□□ 0.76
Clcn6O35454 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Clcn6O35454 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Clcn6O35454 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn6O35454 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.79■□□□□ 0.76
Clcn6O35454 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Clcn6O35454 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn6O35454 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.78■□□□□ 0.76
Clcn6O35454 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn6O35454 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC19.78■□□□□ 0.76
Clcn6O35454 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn6O35454 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn6O35454 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.78■□□□□ 0.76
Clcn6O35454 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn6O35454 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn6O35454 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms