Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col15a1O35206 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col15a1O35206 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col15a1O35206 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Col15a1O35206 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col15a1O35206 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col15a1O35206 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Col15a1O35206 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC24.46■■□□□ 1.51
Col15a1O35206 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC24.46■■□□□ 1.51
Col15a1O35206 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col15a1O35206 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC24.46■■□□□ 1.51
Col15a1O35206 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC24.45■■□□□ 1.51
Col15a1O35206 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Col15a1O35206 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Col15a1O35206 Gm15847-201ENSMUST00000121417 1065 ntBASIC24.45■■□□□ 1.5
Col15a1O35206 AC140264.2-202ENSMUST00000218746 817 ntBASIC24.45■■□□□ 1.5
Col15a1O35206 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col15a1O35206 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col15a1O35206 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col15a1O35206 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col15a1O35206 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col15a1O35206 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col15a1O35206 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Col15a1O35206 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col15a1O35206 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Col15a1O35206 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col15a1O35206 Mir1199-201ENSMUST00000117015 119 ntBASIC24.44■■□□□ 1.5
Col15a1O35206 Gm15565-201ENSMUST00000118890 427 ntBASIC24.44■■□□□ 1.5
Col15a1O35206 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC24.44■■□□□ 1.5
Col15a1O35206 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Col15a1O35206 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Col15a1O35206 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col15a1O35206 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Col15a1O35206 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col15a1O35206 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Col15a1O35206 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC24.43■■□□□ 1.5
Col15a1O35206 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC24.43■■□□□ 1.5
Col15a1O35206 H2-K2-201ENSMUST00000174250 1049 ntBASIC24.43■■□□□ 1.5
Col15a1O35206 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Gm37352-201ENSMUST00000193908 2181 ntBASIC24.43■■□□□ 1.5
Col15a1O35206 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC24.43■■□□□ 1.5
Col15a1O35206 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col15a1O35206 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Col15a1O35206 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col15a1O35206 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC24.42■■□□□ 1.5
Col15a1O35206 Gm15378-201ENSMUST00000121894 207 ntBASIC24.42■■□□□ 1.5
Col15a1O35206 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col15a1O35206 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col15a1O35206 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col15a1O35206 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col15a1O35206 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col15a1O35206 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Col15a1O35206 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col15a1O35206 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col15a1O35206 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col15a1O35206 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col15a1O35206 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC24.41■■□□□ 1.5
Col15a1O35206 Gm13158-201ENSMUST00000122007 736 ntBASIC24.41■■□□□ 1.5
Col15a1O35206 Gm37055-201ENSMUST00000191866 133 ntBASIC24.41■■□□□ 1.5
Col15a1O35206 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col15a1O35206 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC24.4■■□□□ 1.5
Col15a1O35206 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col15a1O35206 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col15a1O35206 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col15a1O35206 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Col15a1O35206 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Col15a1O35206 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Col15a1O35206 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col15a1O35206 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col15a1O35206 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC24.39■■□□□ 1.49
Col15a1O35206 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col15a1O35206 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col15a1O35206 Gm5540-201ENSMUST00000131852 1848 ntBASIC24.38■■□□□ 1.49
Col15a1O35206 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col15a1O35206 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col15a1O35206 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col15a1O35206 CT010444.2-201ENSMUST00000217877 1629 ntBASIC24.38■■□□□ 1.49
Col15a1O35206 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col15a1O35206 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC24.38■■□□□ 1.49
Col15a1O35206 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Col15a1O35206 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms