Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.16□□□□□ -0.46
Pkd1O08852 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pkd1O08852 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pkd1O08852 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkd1O08852 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkd1O08852 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.16□□□□□ -0.46
Pkd1O08852 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pkd1O08852 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pkd1O08852 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pkd1O08852 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Pkd1O08852 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pkd1O08852 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.15□□□□□ -0.46
Pkd1O08852 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pkd1O08852 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.15□□□□□ -0.46
Pkd1O08852 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 Gm17971-201ENSMUST00000190239 806 ntBASIC12.15□□□□□ -0.46
Pkd1O08852 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pkd1O08852 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.15□□□□□ -0.47
Pkd1O08852 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pkd1O08852 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.14□□□□□ -0.47
Pkd1O08852 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.14□□□□□ -0.47
Pkd1O08852 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC12.14□□□□□ -0.47
Pkd1O08852 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.14□□□□□ -0.47
Pkd1O08852 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC12.14□□□□□ -0.47
Pkd1O08852 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.14□□□□□ -0.47
Pkd1O08852 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pkd1O08852 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.14□□□□□ -0.47
Pkd1O08852 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
Pkd1O08852 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pkd1O08852 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.13□□□□□ -0.47
Pkd1O08852 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pkd1O08852 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.12□□□□□ -0.47
Pkd1O08852 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.12□□□□□ -0.47
Pkd1O08852 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pkd1O08852 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pkd1O08852 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pkd1O08852 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pkd1O08852 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Pkd1O08852 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.11□□□□□ -0.47
Pkd1O08852 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.11□□□□□ -0.47
Pkd1O08852 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.11□□□□□ -0.47
Pkd1O08852 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.11□□□□□ -0.47
Pkd1O08852 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Gm6345-202ENSMUST00000180900 204 ntBASIC12.11□□□□□ -0.47
Pkd1O08852 Gm37035-201ENSMUST00000194809 2148 ntBASIC12.11□□□□□ -0.47
Pkd1O08852 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC12.11□□□□□ -0.47
Pkd1O08852 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.11□□□□□ -0.47
Pkd1O08852 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Pkd1O08852 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pkd1O08852 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pkd1O08852 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pkd1O08852 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pkd1O08852 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms