Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ebf3O08791 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf3O08791 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ebf3O08791 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf3O08791 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf3O08791 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf3O08791 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf3O08791 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ebf3O08791 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf3O08791 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.59■□□□□ 0.73
Ebf3O08791 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf3O08791 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf3O08791 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf3O08791 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Ebf3O08791 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ebf3O08791 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ebf3O08791 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf3O08791 Gm22240-201ENSMUST00000175225 82 ntBASIC19.58■□□□□ 0.72
Ebf3O08791 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf3O08791 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf3O08791 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf3O08791 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf3O08791 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf3O08791 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf3O08791 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ebf3O08791 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ebf3O08791 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ebf3O08791 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ebf3O08791 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ebf3O08791 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ebf3O08791 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ebf3O08791 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.56■□□□□ 0.72
Ebf3O08791 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.56■□□□□ 0.72
Ebf3O08791 Gm6211-202ENSMUST00000167849 925 ntBASIC19.56■□□□□ 0.72
Ebf3O08791 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ebf3O08791 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ebf3O08791 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ebf3O08791 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.55■□□□□ 0.72
Ebf3O08791 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf3O08791 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf3O08791 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ebf3O08791 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ebf3O08791 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ebf3O08791 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ebf3O08791 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Ebf3O08791 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf3O08791 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf3O08791 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf3O08791 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf3O08791 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf3O08791 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ebf3O08791 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Ebf3O08791 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.54■□□□□ 0.72
Ebf3O08791 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf3O08791 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf3O08791 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf3O08791 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf3O08791 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf3O08791 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf3O08791 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf3O08791 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.53■□□□□ 0.72
Ebf3O08791 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ebf3O08791 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
Ebf3O08791 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf3O08791 Gm8520-201ENSMUST00000186517 868 ntBASIC19.53■□□□□ 0.72
Ebf3O08791 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.53■□□□□ 0.72
Ebf3O08791 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf3O08791 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf3O08791 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf3O08791 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf3O08791 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf3O08791 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf3O08791 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ebf3O08791 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ebf3O08791 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.52■□□□□ 0.72
Ebf3O08791 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ebf3O08791 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ebf3O08791 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.52■□□□□ 0.72
Ebf3O08791 Gm20049-201ENSMUST00000219950 730 ntBASIC19.52■□□□□ 0.72
Ebf3O08791 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ebf3O08791 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ebf3O08791 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ebf3O08791 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms