Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.37■□□□□ 0.53
Rundc3aO08576 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.37■□□□□ 0.53
Rundc3aO08576 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rundc3aO08576 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rundc3aO08576 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.37■□□□□ 0.53
Rundc3aO08576 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.37■□□□□ 0.53
Rundc3aO08576 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rundc3aO08576 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rundc3aO08576 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.36■□□□□ 0.53
Rundc3aO08576 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
Rundc3aO08576 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rundc3aO08576 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rundc3aO08576 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rundc3aO08576 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.35■□□□□ 0.53
Rundc3aO08576 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.35■□□□□ 0.53
Rundc3aO08576 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 Gm21956-201ENSMUST00000179946 522 ntBASIC18.35■□□□□ 0.53
Rundc3aO08576 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rundc3aO08576 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.34■□□□□ 0.53
Rundc3aO08576 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Rundc3aO08576 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Smad6-203ENSMUST00000179458 273 ntBASIC18.34■□□□□ 0.53
Rundc3aO08576 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.34■□□□□ 0.53
Rundc3aO08576 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rundc3aO08576 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rundc3aO08576 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rundc3aO08576 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rundc3aO08576 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rundc3aO08576 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rundc3aO08576 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rundc3aO08576 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rundc3aO08576 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rundc3aO08576 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rundc3aO08576 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Rundc3aO08576 Gm13241-201ENSMUST00000094493 780 ntBASIC18.33■□□□□ 0.52
Rundc3aO08576 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rundc3aO08576 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Rundc3aO08576 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Rundc3aO08576 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rundc3aO08576 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Rundc3aO08576 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.32■□□□□ 0.52
Rundc3aO08576 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rundc3aO08576 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rundc3aO08576 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.32■□□□□ 0.52
Rundc3aO08576 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rundc3aO08576 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Rundc3aO08576 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.31■□□□□ 0.52
Rundc3aO08576 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.31■□□□□ 0.52
Rundc3aO08576 Mir7075-201ENSMUST00000184187 82 ntBASIC18.31■□□□□ 0.52
Rundc3aO08576 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.31■□□□□ 0.52
Rundc3aO08576 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rundc3aO08576 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rundc3aO08576 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms