Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Usp35M0QWN7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp35M0QWN7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp35M0QWN7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp35M0QWN7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp35M0QWN7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.17■□□□□ 0.82
Usp35M0QWN7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp35M0QWN7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp35M0QWN7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp35M0QWN7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp35M0QWN7 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.16■□□□□ 0.82
Usp35M0QWN7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Usp35M0QWN7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp35M0QWN7 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.16■□□□□ 0.82
Usp35M0QWN7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp35M0QWN7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp35M0QWN7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp35M0QWN7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp35M0QWN7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp35M0QWN7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.15■□□□□ 0.82
Usp35M0QWN7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp35M0QWN7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.14■□□□□ 0.81
Usp35M0QWN7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Usp35M0QWN7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp35M0QWN7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp35M0QWN7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Usp35M0QWN7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.13■□□□□ 0.81
Usp35M0QWN7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp35M0QWN7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Gm13146-201ENSMUST00000118508 780 ntBASIC20.12■□□□□ 0.81
Usp35M0QWN7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp35M0QWN7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.11■□□□□ 0.81
Usp35M0QWN7 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.11■□□□□ 0.81
Usp35M0QWN7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp35M0QWN7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp35M0QWN7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Usp35M0QWN7 Mir5133-201ENSMUST00000174955 77 ntBASIC20.1■□□□□ 0.81
Usp35M0QWN7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Usp35M0QWN7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp35M0QWN7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.1■□□□□ 0.81
Usp35M0QWN7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.1■□□□□ 0.81
Usp35M0QWN7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp35M0QWN7 AA386476-201ENSMUST00000098781 1665 ntBASIC20.1■□□□□ 0.81
Usp35M0QWN7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp35M0QWN7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp35M0QWN7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Usp35M0QWN7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp35M0QWN7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp35M0QWN7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp35M0QWN7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms