Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Gm5812-201ENSMUST00000061073 957 ntBASIC17.81■□□□□ 0.44
Slc28a1E9PXX9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc28a1E9PXX9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc28a1E9PXX9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc28a1E9PXX9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc28a1E9PXX9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc28a1E9PXX9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Gm15546-201ENSMUST00000122095 826 ntBASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc28a1E9PXX9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Gm7417-201ENSMUST00000192950 473 ntBASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Serp2-204ENSMUST00000228055 705 ntBASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a1E9PXX9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a1E9PXX9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a1E9PXX9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a1E9PXX9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a1E9PXX9 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.77■□□□□ 0.44
Slc28a1E9PXX9 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.77■□□□□ 0.44
Slc28a1E9PXX9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a1E9PXX9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a1E9PXX9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a1E9PXX9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slc28a1E9PXX9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
Slc28a1E9PXX9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a1E9PXX9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a1E9PXX9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a1E9PXX9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms