Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30bE9PVL6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30bE9PVL6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30bE9PVL6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim30bE9PVL6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30bE9PVL6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim30bE9PVL6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30bE9PVL6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim30bE9PVL6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim30bE9PVL6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim30bE9PVL6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Gm2559-201ENSMUST00000201323 363 ntBASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim30bE9PVL6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trim30bE9PVL6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Trim30bE9PVL6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim30bE9PVL6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trim30bE9PVL6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim30bE9PVL6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim30bE9PVL6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.16■□□□□ 0.82
Trim30bE9PVL6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim30bE9PVL6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Trim30bE9PVL6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Trim30bE9PVL6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim30bE9PVL6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim30bE9PVL6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Trim30bE9PVL6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim30bE9PVL6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim30bE9PVL6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim30bE9PVL6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim30bE9PVL6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim30bE9PVL6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim30bE9PVL6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim30bE9PVL6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim30bE9PVL6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim30bE9PVL6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim30bE9PVL6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim30bE9PVL6 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.13■□□□□ 0.81
Trim30bE9PVL6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim30bE9PVL6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Dio3-201ENSMUST00000097228 1449 ntBASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim30bE9PVL6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim30bE9PVL6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms