Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.91■□□□□ 0.3
Shank1D3YZU1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shank1D3YZU1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shank1D3YZU1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Shank1D3YZU1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.89■□□□□ 0.3
Shank1D3YZU1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.89■□□□□ 0.3
Shank1D3YZU1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.89■□□□□ 0.3
Shank1D3YZU1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shank1D3YZU1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank1D3YZU1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank1D3YZU1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank1D3YZU1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank1D3YZU1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Shank1D3YZU1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shank1D3YZU1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shank1D3YZU1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shank1D3YZU1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shank1D3YZU1 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.88■□□□□ 0.29
Shank1D3YZU1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Shank1D3YZU1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shank1D3YZU1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.88■□□□□ 0.29
Shank1D3YZU1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shank1D3YZU1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shank1D3YZU1 Gm2399-201ENSMUST00000104944 225 ntBASIC16.88■□□□□ 0.29
Shank1D3YZU1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shank1D3YZU1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.87■□□□□ 0.29
Shank1D3YZU1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Gm15378-201ENSMUST00000121894 207 ntBASIC16.87■□□□□ 0.29
Shank1D3YZU1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Gm43799-201ENSMUST00000201845 579 ntBASIC16.87■□□□□ 0.29
Shank1D3YZU1 Gm44549-201ENSMUST00000208351 577 ntBASIC16.87■□□□□ 0.29
Shank1D3YZU1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.87■□□□□ 0.29
Shank1D3YZU1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shank1D3YZU1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shank1D3YZU1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shank1D3YZU1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shank1D3YZU1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Shank1D3YZU1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shank1D3YZU1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shank1D3YZU1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shank1D3YZU1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shank1D3YZU1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shank1D3YZU1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Shank1D3YZU1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Gm13158-201ENSMUST00000122007 736 ntBASIC16.85■□□□□ 0.29
Shank1D3YZU1 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.85■□□□□ 0.29
Shank1D3YZU1 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.85■□□□□ 0.29
Shank1D3YZU1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shank1D3YZU1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Gm10819-201ENSMUST00000099988 561 ntBASIC16.85■□□□□ 0.29
Shank1D3YZU1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shank1D3YZU1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shank1D3YZU1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.84■□□□□ 0.29
Shank1D3YZU1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms