Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ptchd4B9EKX1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ptchd4B9EKX1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ptchd4B9EKX1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd4B9EKX1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd4B9EKX1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd4B9EKX1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.38■□□□□ 0.85
Ptchd4B9EKX1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ptchd4B9EKX1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Ptchd4B9EKX1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ptchd4B9EKX1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 Gm27275-201ENSMUST00000184318 272 ntBASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ptchd4B9EKX1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Gm12896-201ENSMUST00000118430 226 ntBASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ptchd4B9EKX1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Ptchd4B9EKX1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptchd4B9EKX1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptchd4B9EKX1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptchd4B9EKX1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.33■□□□□ 0.85
Ptchd4B9EKX1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.33■□□□□ 0.85
Ptchd4B9EKX1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Ptchd4B9EKX1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ptchd4B9EKX1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ptchd4B9EKX1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ptchd4B9EKX1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ptchd4B9EKX1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms