Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a4A2AX52 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a4A2AX52 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.91■□□□□ 0.14
Col6a4A2AX52 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a4A2AX52 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.9■□□□□ 0.14
Col6a4A2AX52 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Mir5122-201ENSMUST00000175004 89 ntBASIC15.9■□□□□ 0.14
Col6a4A2AX52 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col6a4A2AX52 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a4A2AX52 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.89■□□□□ 0.13
Col6a4A2AX52 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.89■□□□□ 0.13
Col6a4A2AX52 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Gm7860-201ENSMUST00000121190 879 ntBASIC15.89■□□□□ 0.13
Col6a4A2AX52 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col6a4A2AX52 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.88■□□□□ 0.13
Col6a4A2AX52 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.88■□□□□ 0.13
Col6a4A2AX52 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Col6a4A2AX52 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.88■□□□□ 0.13
Col6a4A2AX52 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.88■□□□□ 0.13
Col6a4A2AX52 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.88■□□□□ 0.13
Col6a4A2AX52 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col6a4A2AX52 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.87■□□□□ 0.13
Col6a4A2AX52 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Gm43799-201ENSMUST00000201845 579 ntBASIC15.87■□□□□ 0.13
Col6a4A2AX52 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col6a4A2AX52 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.86■□□□□ 0.13
Col6a4A2AX52 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Gm44549-201ENSMUST00000208351 577 ntBASIC15.86■□□□□ 0.13
Col6a4A2AX52 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a4A2AX52 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms