Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Scn1aA2APX8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Scn1aA2APX8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.94■□□□□ 0.78
Scn1aA2APX8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.94■□□□□ 0.78
Scn1aA2APX8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn1aA2APX8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn1aA2APX8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn1aA2APX8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn1aA2APX8 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.93■□□□□ 0.78
Scn1aA2APX8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Notumos-201ENSMUST00000151998 2659 ntBASIC19.93■□□□□ 0.78
Scn1aA2APX8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn1aA2APX8 Gm27011-201ENSMUST00000182352 972 ntBASIC19.93■□□□□ 0.78
Scn1aA2APX8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn1aA2APX8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn1aA2APX8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Scn1aA2APX8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn1aA2APX8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Scn1aA2APX8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn1aA2APX8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn1aA2APX8 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.92■□□□□ 0.78
Scn1aA2APX8 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.92■□□□□ 0.78
Scn1aA2APX8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Scn1aA2APX8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn1aA2APX8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn1aA2APX8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scn1aA2APX8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn1aA2APX8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn1aA2APX8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn1aA2APX8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn1aA2APX8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scn1aA2APX8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn1aA2APX8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn1aA2APX8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Gm5408-201ENSMUST00000197998 747 ntBASIC19.88■□□□□ 0.77
Scn1aA2APX8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scn1aA2APX8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn1aA2APX8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Scn1aA2APX8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn1aA2APX8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Scn1aA2APX8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn1aA2APX8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn1aA2APX8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn1aA2APX8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn1aA2APX8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn1aA2APX8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.86■□□□□ 0.77
Scn1aA2APX8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.86■□□□□ 0.77
Scn1aA2APX8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.86■□□□□ 0.77
Scn1aA2APX8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn1aA2APX8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms