Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Chd7A2AJK6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.84■□□□□ 0.61
Chd7A2AJK6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chd7A2AJK6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Gm13158-201ENSMUST00000122007 736 ntBASIC18.84■□□□□ 0.61
Chd7A2AJK6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd7A2AJK6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd7A2AJK6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chd7A2AJK6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd7A2AJK6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd7A2AJK6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chd7A2AJK6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd7A2AJK6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chd7A2AJK6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd7A2AJK6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd7A2AJK6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.81■□□□□ 0.6
Chd7A2AJK6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd7A2AJK6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chd7A2AJK6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd7A2AJK6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd7A2AJK6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd7A2AJK6 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.81■□□□□ 0.6
Chd7A2AJK6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd7A2AJK6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd7A2AJK6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd7A2AJK6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Chd7A2AJK6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd7A2AJK6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.8■□□□□ 0.6
Chd7A2AJK6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd7A2AJK6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd7A2AJK6 Gm21814-202ENSMUST00000203277 873 ntBASIC18.8■□□□□ 0.6
Chd7A2AJK6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.8■□□□□ 0.6
Chd7A2AJK6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd7A2AJK6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Chd7A2AJK6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd7A2AJK6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd7A2AJK6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd7A2AJK6 Ank2-226ENSMUST00000189368 339 ntBASIC18.79■□□□□ 0.6
Chd7A2AJK6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.79■□□□□ 0.6
Chd7A2AJK6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd7A2AJK6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd7A2AJK6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.79■□□□□ 0.6
Chd7A2AJK6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd7A2AJK6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd7A2AJK6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd7A2AJK6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.78■□□□□ 0.6
Chd7A2AJK6 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.78■□□□□ 0.6
Chd7A2AJK6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd7A2AJK6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd7A2AJK6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd7A2AJK6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Chd7A2AJK6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.77■□□□□ 0.6
Chd7A2AJK6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd7A2AJK6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd7A2AJK6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd7A2AJK6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd7A2AJK6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.76■□□□□ 0.59
Chd7A2AJK6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd7A2AJK6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms