Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-1A0N8R1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-1A0N8R1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav12-1A0N8R1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Gm43137-201ENSMUST00000198052 594 ntBASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Grk6-206ENSMUST00000224995 2971 ntBASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Gm9847-201ENSMUST00000052528 599 ntBASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-1A0N8R1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms