Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc112A0AUP1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc112A0AUP1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc112A0AUP1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc112A0AUP1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ccdc112A0AUP1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc112A0AUP1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
Ccdc112A0AUP1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc112A0AUP1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc112A0AUP1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc112A0AUP1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc112A0AUP1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Gm13241-201ENSMUST00000094493 780 ntBASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc112A0AUP1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Smad6-203ENSMUST00000179458 273 ntBASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc112A0AUP1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc112A0AUP1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.52■■□□□ 1.04
Ccdc112A0AUP1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ccdc112A0AUP1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ccdc112A0AUP1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ccdc112A0AUP1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ccdc112A0AUP1 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Gm11421-201ENSMUST00000122124 294 ntBASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Mir7075-201ENSMUST00000184187 82 ntBASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc112A0AUP1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc112A0AUP1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc112A0AUP1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms