Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5580A0A0N4SVP8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Rarb-207ENSMUST00000225921 2756 ntBASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5580A0A0N4SVP8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Grk6-206ENSMUST00000224995 2971 ntBASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Gm5580A0A0N4SVP8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5580A0A0N4SVP8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5580A0A0N4SVP8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5580A0A0N4SVP8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.52■□□□□ 0.88
Gm5580A0A0N4SVP8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.52■□□□□ 0.88
Gm5580A0A0N4SVP8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.52■□□□□ 0.88
Gm5580A0A0N4SVP8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5580A0A0N4SVP8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5580A0A0N4SVP8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5580A0A0N4SVP8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5580A0A0N4SVP8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Gm21956-201ENSMUST00000179946 522 ntBASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5580A0A0N4SVP8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Gm5580A0A0N4SVP8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm5580A0A0N4SVP8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gm5580A0A0N4SVP8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm5580A0A0N4SVP8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.49■□□□□ 0.87
Gm5580A0A0N4SVP8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.49■□□□□ 0.87
Gm5580A0A0N4SVP8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms