Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbv29A0A0G2LB96 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv29A0A0G2LB96 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv29A0A0G2LB96 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Trbv29A0A0G2LB96 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv29A0A0G2LB96 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Grk6-206ENSMUST00000224995 2971 ntBASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv29A0A0G2LB96 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv29A0A0G2LB96 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms