Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav23A0A0G2JG17 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Gm8495-201ENSMUST00000188740 694 ntBASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Gm10493-201ENSMUST00000097270 612 ntBASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.43■□□□□ 0.06
Trav23A0A0G2JG17 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav23A0A0G2JG17 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav23A0A0G2JG17 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav23A0A0G2JG17 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Gm42778-201ENSMUST00000199644 553 ntBASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav23A0A0G2JG17 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav23A0A0G2JG17 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms