Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv15A0A0A6YYE3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv15A0A0A6YYE3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv15A0A0A6YYE3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv15A0A0A6YYE3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv15A0A0A6YYE3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv15A0A0A6YYE3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv15A0A0A6YYE3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv15A0A0A6YYE3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv15A0A0A6YYE3 Cap2-205ENSMUST00000225824 1634 ntBASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv15A0A0A6YYE3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv15A0A0A6YYE3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trbv15A0A0A6YYE3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv15A0A0A6YYE3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv15A0A0A6YYE3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbv15A0A0A6YYE3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv15A0A0A6YYE3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbv15A0A0A6YYE3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv15A0A0A6YYE3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv15A0A0A6YYE3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv15A0A0A6YYE3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv15A0A0A6YYE3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms