Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Gm43530-201ENSMUST00000195920 274 ntBASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm9847-201ENSMUST00000052528 599 ntBASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv23A0A0A6YWQ1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv23A0A0A6YWQ1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv23A0A0A6YWQ1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Golgb1-201ENSMUST00000023534 498 ntBASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv23A0A0A6YWQ1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv23A0A0A6YWQ1 Fst-202ENSMUST00000223640 2612 ntBASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv23A0A0A6YWQ1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trbv23A0A0A6YWQ1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv23A0A0A6YWQ1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms