Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6d-5A0A075B6B9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6d-5A0A075B6B9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6d-5A0A075B6B9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6d-5A0A075B6B9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6d-5A0A075B6B9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6d-5A0A075B6B9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6d-5A0A075B6B9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms