Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-4A0A075B6B4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-4A0A075B6B4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-4A0A075B6B4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.08
Trav6-4A0A075B6B4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Gm5874-201ENSMUST00000096101 508 ntBASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-4A0A075B6B4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Reep4-203ENSMUST00000226563 1444 ntBASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-4A0A075B6B4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms