Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav12-3A0A075B648 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-3A0A075B648 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-3A0A075B648 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-3A0A075B648 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav12-3A0A075B648 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav12-3A0A075B648 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Trav12-3A0A075B648 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
Trav12-3A0A075B648 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav12-3A0A075B648 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-3A0A075B648 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-3A0A075B648 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-3A0A075B648 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-3A0A075B648 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav12-3A0A075B648 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms