Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav8-1A0A075B641 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8-1A0A075B641 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 BC021767-201ENSMUST00000126387 1716 ntBASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8-1A0A075B641 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Fst-202ENSMUST00000223640 2612 ntBASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8-1A0A075B641 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8-1A0A075B641 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav8-1A0A075B641 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8-1A0A075B641 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav8-1A0A075B641 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8-1A0A075B641 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav8-1A0A075B641 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8-1A0A075B641 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8-1A0A075B641 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms