Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-2A0A075B638 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-2A0A075B638 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-2A0A075B638 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4-2A0A075B638 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-2A0A075B638 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trav4-2A0A075B638 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-2A0A075B638 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-2A0A075B638 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav4-2A0A075B638 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav4-2A0A075B638 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-2A0A075B638 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4-2A0A075B638 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav4-2A0A075B638 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav4-2A0A075B638 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4-2A0A075B638 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4-2A0A075B638 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms