Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.19■□□□□ 0.66
Speer3W4VSP1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Speer3W4VSP1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Speer3W4VSP1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Speer3W4VSP1 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.17■□□□□ 0.66
Speer3W4VSP1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Speer3W4VSP1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Speer3W4VSP1 Rarb-207ENSMUST00000225921 2756 ntBASIC19.16■□□□□ 0.66
Speer3W4VSP1 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.16■□□□□ 0.66
Speer3W4VSP1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Speer3W4VSP1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Speer3W4VSP1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.16■□□□□ 0.66
Speer3W4VSP1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
Speer3W4VSP1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
Speer3W4VSP1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Speer3W4VSP1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.16■□□□□ 0.66
Speer3W4VSP1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Speer3W4VSP1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.15■□□□□ 0.66
Speer3W4VSP1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Speer3W4VSP1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Speer3W4VSP1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Speer3W4VSP1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Speer3W4VSP1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Speer3W4VSP1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Speer3W4VSP1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Speer3W4VSP1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Speer3W4VSP1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Speer3W4VSP1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Speer3W4VSP1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Speer3W4VSP1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Speer3W4VSP1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Speer3W4VSP1 Gm12821-201ENSMUST00000120022 600 ntBASIC19.13■□□□□ 0.65
Speer3W4VSP1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms