Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm5493S4R2D1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Gm10399-202ENSMUST00000202768 748 ntBASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm5493S4R2D1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm5493S4R2D1 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.04■□□□□ 0.16
Gm5493S4R2D1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm5493S4R2D1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Gm5493S4R2D1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.02■□□□□ 0.16
Gm5493S4R2D1 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.02■□□□□ 0.16
Gm5493S4R2D1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms