Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk1bQ9Z2C6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk1bQ9Z2C6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Upk1bQ9Z2C6 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.58■□□□□ 0.41
Upk1bQ9Z2C6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk1bQ9Z2C6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Upk1bQ9Z2C6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk1bQ9Z2C6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Upk1bQ9Z2C6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Upk1bQ9Z2C6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Gm7417-201ENSMUST00000192950 473 ntBASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk1bQ9Z2C6 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.56■□□□□ 0.4
Upk1bQ9Z2C6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk1bQ9Z2C6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Serp2-204ENSMUST00000228055 705 ntBASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk1bQ9Z2C6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Upk1bQ9Z2C6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Upk1bQ9Z2C6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms