Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm22240-201ENSMUST00000175225 82 ntBASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm8520-201ENSMUST00000186517 868 ntBASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1h3Q9Z0Y9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm7860-201ENSMUST00000121190 879 ntBASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.58■□□□□ 0.88
Nr1h3Q9Z0Y9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
Nr1h3Q9Z0Y9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nr1h3Q9Z0Y9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nr1h3Q9Z0Y9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 Gm12527-201ENSMUST00000117967 564 ntBASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.57■□□□□ 0.88
Nr1h3Q9Z0Y9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1h3Q9Z0Y9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1h3Q9Z0Y9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nr1h3Q9Z0Y9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1h3Q9Z0Y9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1h3Q9Z0Y9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1h3Q9Z0Y9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1h3Q9Z0Y9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1h3Q9Z0Y9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1h3Q9Z0Y9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1h3Q9Z0Y9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Golph3-202ENSMUST00000226517 2359 ntBASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1h3Q9Z0Y9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.52■□□□□ 0.88
Nr1h3Q9Z0Y9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms