Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cldn9Q9Z0S7 BC021767-201ENSMUST00000126387 1716 ntBASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Gm7860-201ENSMUST00000121190 879 ntBASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn9Q9Z0S7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn9Q9Z0S7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn9Q9Z0S7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Cldn9Q9Z0S7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cldn9Q9Z0S7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cldn9Q9Z0S7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn9Q9Z0S7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn9Q9Z0S7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms