Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcb1Q9Z0H3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smarcb1Q9Z0H3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcb1Q9Z0H3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.74
Smarcb1Q9Z0H3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcb1Q9Z0H3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Gm26524-201ENSMUST00000192339 390 ntBASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcb1Q9Z0H3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcb1Q9Z0H3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Rab3c-203ENSMUST00000224180 967 ntBASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcb1Q9Z0H3 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcb1Q9Z0H3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Gm20760-201ENSMUST00000179197 648 ntBASIC19.65■□□□□ 0.74
Smarcb1Q9Z0H3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms