Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn2Q9R0A1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn2Q9R0A1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn2Q9R0A1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn2Q9R0A1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn2Q9R0A1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn2Q9R0A1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn2Q9R0A1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn2Q9R0A1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 Smad6-203ENSMUST00000179458 273 ntBASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn2Q9R0A1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clcn2Q9R0A1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Rarb-207ENSMUST00000225921 2756 ntBASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn2Q9R0A1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn2Q9R0A1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms