Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp1Q9R060 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp1Q9R060 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.48■□□□□ 0.23
Nubp1Q9R060 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.48■□□□□ 0.23
Nubp1Q9R060 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nubp1Q9R060 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nubp1Q9R060 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nubp1Q9R060 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.47■□□□□ 0.23
Nubp1Q9R060 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp1Q9R060 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nubp1Q9R060 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nubp1Q9R060 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.47■□□□□ 0.23
Nubp1Q9R060 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.46■□□□□ 0.23
Nubp1Q9R060 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nubp1Q9R060 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nubp1Q9R060 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nubp1Q9R060 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.45■□□□□ 0.22
Nubp1Q9R060 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Gm715-201ENSMUST00000117865 831 ntBASIC16.45■□□□□ 0.22
Nubp1Q9R060 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Nubp1Q9R060 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nubp1Q9R060 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nubp1Q9R060 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nubp1Q9R060 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.43■□□□□ 0.22
Nubp1Q9R060 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nubp1Q9R060 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nubp1Q9R060 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nubp1Q9R060 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nubp1Q9R060 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nubp1Q9R060 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nubp1Q9R060 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nubp1Q9R060 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nubp1Q9R060 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nubp1Q9R060 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms