Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn5aQ9JJV9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Scn5aQ9JJV9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Gm11249-201ENSMUST00000117071 859 ntBASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn5aQ9JJV9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Gm6576-201ENSMUST00000169678 883 ntBASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Gm44549-201ENSMUST00000208351 577 ntBASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.75■□□□□ 0.75
Scn5aQ9JJV9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn5aQ9JJV9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn5aQ9JJV9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn5aQ9JJV9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn5aQ9JJV9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn5aQ9JJV9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn5aQ9JJV9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scn5aQ9JJV9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn5aQ9JJV9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn5aQ9JJV9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn5aQ9JJV9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.73■□□□□ 0.75
Scn5aQ9JJV9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn5aQ9JJV9 Gm37055-201ENSMUST00000191866 133 ntBASIC19.73■□□□□ 0.75
Scn5aQ9JJV9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn5aQ9JJV9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Gm15565-201ENSMUST00000118890 427 ntBASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn5aQ9JJV9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Gm13836-201ENSMUST00000121159 501 ntBASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Gm7977-201ENSMUST00000193787 748 ntBASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn5aQ9JJV9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Scn5aQ9JJV9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms