Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Zc3h8Q9JJ48 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Zc3h8Q9JJ48 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zc3h8Q9JJ48 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.59■□□□□ 0.41
Zc3h8Q9JJ48 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.59■□□□□ 0.41
Zc3h8Q9JJ48 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zc3h8Q9JJ48 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.59■□□□□ 0.41
Zc3h8Q9JJ48 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zc3h8Q9JJ48 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zc3h8Q9JJ48 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zc3h8Q9JJ48 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zc3h8Q9JJ48 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zc3h8Q9JJ48 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Zc3h8Q9JJ48 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zc3h8Q9JJ48 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zc3h8Q9JJ48 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zc3h8Q9JJ48 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zc3h8Q9JJ48 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Zc3h8Q9JJ48 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zc3h8Q9JJ48 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.58■□□□□ 0.4
Zc3h8Q9JJ48 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Zc3h8Q9JJ48 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zc3h8Q9JJ48 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Gm12933-201ENSMUST00000120203 872 ntBASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Gm6420-201ENSMUST00000193885 723 ntBASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zc3h8Q9JJ48 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Zc3h8Q9JJ48 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Nespas-201ENSMUST00000143738 1083 ntBASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Zc3h8Q9JJ48 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Zc3h8Q9JJ48 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms