Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gtf3c6Q9D8P7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Gm43060-201ENSMUST00000200621 289 ntBASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gtf3c6Q9D8P7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf3c6Q9D8P7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf3c6Q9D8P7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gtf3c6Q9D8P7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gtf3c6Q9D8P7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.2■□□□□ 0.82
Gtf3c6Q9D8P7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gtf3c6Q9D8P7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Gtf3c6Q9D8P7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gtf3c6Q9D8P7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gtf3c6Q9D8P7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gtf3c6Q9D8P7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.16■□□□□ 0.82
Gtf3c6Q9D8P7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms