Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sh2d4aQ9D7V1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4aQ9D7V1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2d4aQ9D7V1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d4aQ9D7V1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.29■□□□□ 0.52
Sh2d4aQ9D7V1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sh2d4aQ9D7V1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d4aQ9D7V1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Sh2d4aQ9D7V1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms