Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.02■□□□□ 0.48
Upk1aQ9D132 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1aQ9D132 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.02■□□□□ 0.48
Upk1aQ9D132 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1aQ9D132 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.02■□□□□ 0.48
Upk1aQ9D132 Gm45102-201ENSMUST00000207427 857 ntBASIC18.02■□□□□ 0.48
Upk1aQ9D132 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1aQ9D132 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1aQ9D132 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Upk1aQ9D132 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Upk1aQ9D132 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Gm14117-201ENSMUST00000122417 843 ntBASIC18.01■□□□□ 0.47
Upk1aQ9D132 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.01■□□□□ 0.47
Upk1aQ9D132 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1aQ9D132 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk1aQ9D132 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18■□□□□ 0.47
Upk1aQ9D132 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18■□□□□ 0.47
Upk1aQ9D132 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk1aQ9D132 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk1aQ9D132 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk1aQ9D132 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
Upk1aQ9D132 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18■□□□□ 0.47
Upk1aQ9D132 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk1aQ9D132 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Upk1aQ9D132 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1aQ9D132 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.98■□□□□ 0.47
Upk1aQ9D132 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Upk1aQ9D132 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1aQ9D132 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Upk1aQ9D132 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Upk1aQ9D132 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1aQ9D132 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1aQ9D132 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1aQ9D132 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1aQ9D132 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1aQ9D132 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Upk1aQ9D132 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Rps24-207ENSMUST00000224568 714 ntBASIC17.96■□□□□ 0.47
Upk1aQ9D132 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.96■□□□□ 0.47
Upk1aQ9D132 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Upk1aQ9D132 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Upk1aQ9D132 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.95■□□□□ 0.46
Upk1aQ9D132 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.95■□□□□ 0.46
Upk1aQ9D132 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms