Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd1Q9D0E3 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lysmd1Q9D0E3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 Flg-201ENSMUST00000050758 1488 ntBASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.52■□□□□ 0.88
Lysmd1Q9D0E3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lysmd1Q9D0E3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.51■□□□□ 0.87
Lysmd1Q9D0E3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd1Q9D0E3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd1Q9D0E3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.5■□□□□ 0.87
Lysmd1Q9D0E3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.5■□□□□ 0.87
Lysmd1Q9D0E3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd1Q9D0E3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 AW822252-206ENSMUST00000208904 237 ntBASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 Gm18669-201ENSMUST00000216049 778 ntBASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd1Q9D0E3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 Mir5130-201ENSMUST00000175160 84 ntBASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd1Q9D0E3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.47■□□□□ 0.87
Lysmd1Q9D0E3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Gm22697-201ENSMUST00000175194 63 ntBASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd1Q9D0E3 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms