Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim13Q9CYB0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim13Q9CYB0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.49■□□□□ 0.39
Trim13Q9CYB0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim13Q9CYB0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.48■□□□□ 0.39
Trim13Q9CYB0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim13Q9CYB0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 BC021767-201ENSMUST00000126387 1716 ntBASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim13Q9CYB0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim13Q9CYB0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim13Q9CYB0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim13Q9CYB0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim13Q9CYB0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim13Q9CYB0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.45■□□□□ 0.38
Trim13Q9CYB0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms