Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ssu72Q9CY97 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ssu72Q9CY97 Gm22238-201ENSMUST00000175222 88 ntBASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssu72Q9CY97 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ssu72Q9CY97 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssu72Q9CY97 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssu72Q9CY97 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.84■□□□□ 0.61
Ssu72Q9CY97 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssu72Q9CY97 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.84■□□□□ 0.61
Ssu72Q9CY97 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ssu72Q9CY97 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssu72Q9CY97 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssu72Q9CY97 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Ssu72Q9CY97 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ssu72Q9CY97 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssu72Q9CY97 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssu72Q9CY97 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.83■□□□□ 0.6
Ssu72Q9CY97 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ssu72Q9CY97 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.83■□□□□ 0.6
Ssu72Q9CY97 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssu72Q9CY97 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssu72Q9CY97 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssu72Q9CY97 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.83■□□□□ 0.6
Ssu72Q9CY97 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ssu72Q9CY97 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssu72Q9CY97 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Ssu72Q9CY97 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssu72Q9CY97 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ssu72Q9CY97 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssu72Q9CY97 Gm15820-201ENSMUST00000201566 728 ntBASIC18.82■□□□□ 0.6
Ssu72Q9CY97 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssu72Q9CY97 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssu72Q9CY97 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssu72Q9CY97 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ssu72Q9CY97 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssu72Q9CY97 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssu72Q9CY97 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssu72Q9CY97 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ssu72Q9CY97 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssu72Q9CY97 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssu72Q9CY97 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.81■□□□□ 0.6
Ssu72Q9CY97 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssu72Q9CY97 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssu72Q9CY97 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssu72Q9CY97 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssu72Q9CY97 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssu72Q9CY97 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms