Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot11Q9CWN7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Smad6-203ENSMUST00000179458 273 ntBASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Gm43017-201ENSMUST00000198296 752 ntBASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.41■□□□□ 0.54
Cnot11Q9CWN7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot11Q9CWN7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cnot11Q9CWN7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cnot11Q9CWN7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cnot11Q9CWN7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Gm15039-201ENSMUST00000118914 875 ntBASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot11Q9CWN7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Gm26833-201ENSMUST00000180899 440 ntBASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cnot11Q9CWN7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot11Q9CWN7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Serp2-204ENSMUST00000228055 705 ntBASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot11Q9CWN7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot11Q9CWN7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot11Q9CWN7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot11Q9CWN7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot11Q9CWN7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot11Q9CWN7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms