Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.48■□□□□ 0.55
Trim16Q99PP9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.48■□□□□ 0.55
Trim16Q99PP9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Serp2-204ENSMUST00000228055 705 ntBASIC18.48■□□□□ 0.55
Trim16Q99PP9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim16Q99PP9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.47■□□□□ 0.55
Trim16Q99PP9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim16Q99PP9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim16Q99PP9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Trim16Q99PP9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trim16Q99PP9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim16Q99PP9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim16Q99PP9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim16Q99PP9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim16Q99PP9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim16Q99PP9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim16Q99PP9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim16Q99PP9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim16Q99PP9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.44■□□□□ 0.54
Trim16Q99PP9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim16Q99PP9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.43■□□□□ 0.54
Trim16Q99PP9 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.43■□□□□ 0.54
Trim16Q99PP9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim16Q99PP9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.42■□□□□ 0.54
Trim16Q99PP9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim16Q99PP9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim16Q99PP9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms