Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf2ird2Q99NI3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf2ird2Q99NI3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf2ird2Q99NI3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf2ird2Q99NI3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Gm13534-201ENSMUST00000121169 513 ntBASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf2ird2Q99NI3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2ird2Q99NI3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2ird2Q99NI3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2ird2Q99NI3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.41■□□□□ 0.7
Gtf2ird2Q99NI3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.41■□□□□ 0.7
Gtf2ird2Q99NI3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2ird2Q99NI3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2ird2Q99NI3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gtf2ird2Q99NI3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Gm12933-201ENSMUST00000120203 872 ntBASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2ird2Q99NI3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gtf2ird2Q99NI3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gtf2ird2Q99NI3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gtf2ird2Q99NI3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms