Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp1b1Q99LU0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Gm11421-201ENSMUST00000122124 294 ntBASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Gm43017-201ENSMUST00000198296 752 ntBASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Gm6139-201ENSMUST00000079261 882 ntBASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1b1Q99LU0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1b1Q99LU0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Gm43173-201ENSMUST00000202246 593 ntBASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1b1Q99LU0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Chmp1b1Q99LU0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp1b1Q99LU0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1b1Q99LU0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Chmp1b1Q99LU0 Serp2-204ENSMUST00000228055 705 ntBASIC17.83■□□□□ 0.44
Chmp1b1Q99LU0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1b1Q99LU0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Chmp1b1Q99LU0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Chmp1b1Q99LU0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Smad6-203ENSMUST00000179458 273 ntBASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1b1Q99LU0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Gm26833-201ENSMUST00000180899 440 ntBASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Gm40848-201ENSMUST00000221998 324 ntBASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1b1Q99LU0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1b1Q99LU0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1b1Q99LU0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1b1Q99LU0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.8■□□□□ 0.44
Chmp1b1Q99LU0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1b1Q99LU0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp1b1Q99LU0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1b1Q99LU0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1b1Q99LU0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms